VCH = Valve Cover Harness
UVCH = Under Valve Cover Harness
The valve cover gasket has a connector for the injector and glow plug harness. One connector on the outside to the main harness, and one inside that connects to the injector and glow plug harness. The UVCH will vibrate loose. Ford has a repair clip both sides of the connector. Make sure you get the one for under the VC, they will often give you the external repair clip. Check for loose connections at all points on the harness and make sure that TS chip is plugged in good, or pull it and see if it starts then (REMOVE KEYS FROM IGNITION, NOT JUST IN OFF POSITION!!!). If that Bully Dog plugs into the data port, unplug it, sounds like it's useless anyway.
It would be a good idea to find someone with a real scan tool. If the SES light is thrown it should be logging a code. Otherwise we are all just shooting in the dark as it could be several problems and it will just frustrate everyone.